Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNAAQALATPVRLDIRPVAGRIGAEIRGVTLSGELDAATVEAIQAALVRHKVIFFRDQSHLDDQTQEAFAHLLGEPVAHPTVPSREGTRFLLELDGAEGRRANS--WHTDVTFVEAYPKASILRSVVAPESGGDTVWANTASAYADLPAELRELADRLWAVHSNEYDYAGVKPSASVEQLENYRKVFTSTVYETEHPVVRVHPQSGERTLLLGH-FVKRLKGLSQHDSAHLFAVLQGHVTRLENTVRWRWQAGDVAIWDNRATQHYAIDDYGDQPRVVRRVTLGGDVPVGIDGQRSRTIRKA
1GY9 Chain:B ((4-279))------------RLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQA-ITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSFPEYKY-----EHQRWREAVAKNP-PLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKESEALLSFLFAHITKPEFQVRWRWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATILGDKPFYRA----------


General information:
TITO was launched using:
RESULT:

Template: 1GY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81692 for 2226 contacts (-36.7/contact) +
2D Compatibility (PS) -28811 + (NN) -10840 + (LL) 1928
1D Compatibility (HY) -18000 + (ID) 5300
Total energy: -142715.0 ( -64.11 by residue)
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_1GY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GY9-query.scw
PDB file : Tito_Scwrl_1GY9.pdb: