Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIPRLPPLNAVRAFEAAARLGSYVAAAKALHVTQPAVGRHVRLLEDWLGARLFERTSRGVLLTPAGRQYYAAVSTALQQIAEAGGQLSGARWLRIMAVPAFSRRWLTSRLETLCAQRPGLKIALEPNPTFDHVEERSADLGIVYGLP---GQYANPRALLIRPKVFPVCSPAYLAAAGPLESAEQLVAHKLIHVDDGEWW--NLWFSAIGVDVEVRPAVLYLSN-DHALARAEEGLGIALANEVLVRQELRSGALVRPLAAE--AALECYQVLTPPGT-PSADVEWFIGWLGEALREEFPDAVTS |
| 3HHF Chain:B ((6-208)) | ------------------------------------------------------------------------------------------QGVLSVDSAMPMVLHLLAPLAAKFNERYPHIRLSLVSSEGYINLIERKVDIALRAG--DDSGLR---ARHLFDSRFRVIASPEYLAKHGTPQSTEELAGHQCLGFTEPGSLNTWAVLDAQGNPY-KISPHFTASSGEILRSLCLSGCGIVCLSDFLVDNDIAEGKLIPLLAEQTSDKTHPFNAVYYSDKAVNLRLRVFLDFLVEELG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139904 for 1448 contacts (-96.6/contact) +
2D Compatibility (PS) -20324 + (NN) 534 + (LL) 7668
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -163426.0 ( -112.86 by residue)
QMean score : 0.358
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