Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTSTLTLDGVSFQLPDGSLLFSDLDETFDT-RHTGLVGRNGVGKSLLARLLAGHLQPSS--GSVRRQGRVRYL----AQQL-EPADYPTVADLAGVRPWLEALARIEAGSLDAADYECLGERWDIRQRLADALAAEGLGHLRADTPSERLSGGECMRVALLGAFLDDADFLILDEPSNPLDGPARALLRARLAAW---DGGLLLVSHDRELLEGMQRIVELSTLGLRSYGGGYSFYAQSREEAREAAERRLDQRRLERKRQTLAMREQQQRQERCQASGRREGKTANQAKILLGGFRERSEVSAGKLRNAHQAERERLDREVREAAREVEEASPLLLDSPDAELAAQRRIVELKGAVLPHLRGPLREIDLLLSGPRRLALVGPNGSGKSTLLRLLAGQRAPLAGTCAVTVGAAYLDQRLSVLDHGRGVLEQLLEVNRS--RGESWLRTRLAQLGLPAERLAQPCATLSGGERLKAALALVLYADRPAQLLLLDEPDNHLDLAARQALESMLGQY----RGALLVVSHDPVFLRHLALDGELRATAAGWRLEDR |
| 1YQT Chain:A ((25-476)) | ---------EDCVHRYGVNAFVLYRLP-VVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKPQ-YVDLIPKAVKG-----KVIELLKKADETGKLEEVVKALEL-ENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEP----GVYGIFSQPKGT-----RNGINE-------F------LRGYLKD-E----N---------V---------------RFRPYEIKFTKT-----------GE--RVE--------IERETLVTYPRLVKDYGSFRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLTVAYKPQYIKA-DYEGTVYELLSKIDASKLNSNFYKTELLKPLGII-DLYDREVNELSGGELQRVAIAATLL--RDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSD-RLMVFEGEPGKYGRA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162281 for 3564 contacts (-45.5/contact) +
2D Compatibility (PS) -46732 + (NN) -25325 + (LL) 6144
1D Compatibility (HY) -26000 + (ID) 5200
Total energy: -259394.0 ( -72.78 by residue)
QMean score : 0.382
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