Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDRYIAFANSPVGRRLVGAVGLPSPLRLERWQAGRVRPVDGPLVIGGSGALAEAVLPFAGKLTDAVFAAVDGQFELPRWTAEHSPRAKAVLFDASGLTRFEQLVALRDFFQPVLKGLDKCPKVVVLGRPPESLKDPVTASVQRSLEGFTRSLGKEIRRGGNVQLLYVGKGAEDQLEGALRFFLSPKSAYVSGQVIRLAANSAQVHDWSKPLAGQRALVTGAARGIGAAIAETLARDGAEVVLLDVPPAREALEGLAARLG--GRAVALDICAADAGQQLVEALPEG---VDIVVHNAGITRDKTLAKMSSDFWNSVINVNLNAPQVLTQALLDGGKLHDNGRVVLLASISGIAGNLGQSNYAVSKAGLIGLAQAWAPALGKRGITINAVAPGFIETQMTAAIPLTIRE-------AGRRMNSMSQGGLPQDVAETVAWFAQPSSGAVSGQVLRVCGQSLLGA |
| 1Q7B Chain:C ((5-239)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GKIALVTGASRGIGRAIAETLAARGAKVI--GTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRL-------GGAQEIANAVAFLASDEAAYITGETLHVNG------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Q7B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -123683 for 1886 contacts (-65.6/contact) +
2D Compatibility (PS) -23901 + (NN) -1799 + (LL) 14384
1D Compatibility (HY) -14800 + (ID) 4700
Total energy: -154499.0 ( -81.92 by residue)
QMean score : 0.485
|
|
|