Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLLLLLLVLLELGEAQGSLHRVPLRRHPSLKKKLRARSQLSEFWKSHNLDMIQFTESCSMDQSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACKTHSRFQPSQSSTYSQPGQSFSIQYGTGSLSGIIGADQVSAFATQVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGG--------VTPVFDNMMAQNLVDLPMFSVYMSSNPE-GGAGSELIFGGYDHSHFSGSLNWVPVTK----QAYWQIALDNIQVG-GTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP--VDGEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVD-----GMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVP |
1WKR Chain:A ((3-333)) | -----------------------------------------------------------------GSVPATNQL-VDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD----------KSYVKTSTS--SATSDKVSVTYGSGSFSGTEYTDTVT-----LGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSI-L-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVADNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194454 for 2693 contacts (-72.2/contact) +
2D Compatibility (PS) -33283 + (NN) -11245 + (LL) 6968
1D Compatibility (HY) -18000 + (ID) 4850
Total energy: -254864.0 ( -94.64 by residue)
QMean score : 0.317
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