Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHSDAHKLYLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKP-SFPQWRR-KDL-SQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQES |
| 4BGQ Chain:A ((10-300)) | ---VMNKFEILGVVGEGAYGVVLKCRHKETH---EIVAIKKFK-------VKETTLRELKMLRTLKQENIVELKEAFRRRG-KLYLVFEYVEKNMLELLEEMP--NGVPPEKVKSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE----------TRWYRSPELLLG-APYGKSVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPSEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILNSVLLDLMKNLLKLDPADRYLTEQCLNHPTFQT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BGQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165984 for 2082 contacts (-79.7/contact) +
2D Compatibility (PS) -28430 + (NN) -8910 + (LL) 1088
1D Compatibility (HY) -30800 + (ID) 5400
Total energy: -238436.0 ( -114.52 by residue)
QMean score : 0.441
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