Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1RC4 Chain:A ((1-159))
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLDKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
1RC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111560 for 1190 contacts (-93.7/contact) +
2D Compatibility (PS) -17635 + (NN) -12460 + (LL) 0
1D Compatibility (HY) -22400 + (ID) 7900
Total energy: -171955.0 ( -144.50 by residue)
QMean score : 0.766
(partial model without unconserved sides chains):
PDB file :
Tito_1RC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RC4-query.scw
PDB file :
Tito_Scwrl_1RC4.pdb
: