Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFSALLLEVIWILAADGGQHWTYEGPHGQDHWPASYP---ECG-NNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPS-T--LYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTGEMLSLGVGILVGCLCLLLAVYFIARKIRKKRLENRKSVVFTSAQATTEA |
| 1KOP Chain:A ((1-222)) | ------------------HTHWGYTGHDSPESWGNLSEEFRLCSTGKNQSPVNITET---VSGKLPAIKV-NYKPS---MVDVENNGHTIQVNYPEGGNTLTVNG--RTYTLKQFHFHV-------PSENQIKGRTFPMEAHFVHLDEN------------KQPLVLAVLYEAGK-TNGRLSSIWNVMPMTA--GKVKLNQPFDASTLLPKR-LKYYRFAGSLTTPPCTEGVSWLVLKTYDHIDQAQAEKFTRAVG---------S-ENNRPVQPLNARVVI-------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1KOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -110831 for 1650 contacts (-67.2/contact) +
2D Compatibility (PS) -22501 + (NN) -8409 + (LL) 8968
1D Compatibility (HY) -14000 + (ID) 3800
Total energy: -150573.0 ( -91.26 by residue)
QMean score : 0.228
|
|
|