Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLSRWLRSVGVFLLPAPYWAPRERWLGSLRRPSLVHGYPVLAWHSARCWCQAWTEEPRALCSSLRMNGDQNSDVYAQEKQDFVQHFSQIVRVLTEDEMG-HPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAFRELVEPRK---QDAD-SLQRAWTVGWCVELLQAFFLVADDIMDSSLTRRGQICWYQKPGVGL-DAINDANLLEACIYRLLKLYCREQPYYLNLIELFLQSSYQTEIGQTLDLLTAPQ-----------GNVDLVRFTEKRYKSIVKYKTAFYSFYLPIAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRATPEQYQILKENYGQKEAEKVARVKALYEELDLPAVFLQYEEDSYSHIMALIEQYAAPL--PPAVFLGLARKIYKRRK
1YHL Chain:A ((3-362))------------------------------------------------------------------------------SMERFLSVYDEVQAFLLDQLQSKYEIDPNRARYLRIMMDTTCLGGKYFRGMTVVNVAEGFLAVTQHDEATKERILHDACVGGWMIEFLQAHYLVEDDIMDGSVMRRGKPCWYRFPGVTTQCAINDGIILKSWTQIMAWHYFADRPFLKDLLCLFQKVDYATAVGQMYDVTSMCDSNKLDPEVAQPMTTDFAEFTPAIYKRIVKYKTTFYTYLLPLVMGLFVSEAAASVEMNLVERVAHLIGEYFQVQDDVMDCFTPPEQLGKVGTDIEDAKCSWLAVTFLGKANAAQVAEFKANYGDKDPAKVAVVKRLYSEANLQADFAAYEAEVVREVESLIEQLKVKSPTFAESVAVVWEKTHKRKK


General information:
TITO was launched using:
RESULT:

Template: 1YHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -177773 for 2765 contacts (-64.3/contact) +
2D Compatibility (PS) -37047 + (NN) -24146 + (LL) 5164
1D Compatibility (HY) -25600 + (ID) 6000
Total energy: -265402.0 ( -95.99 by residue)
QMean score : 0.422

(partial model without unconserved sides chains):
PDB file : Tito_1YHL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YHL-query.scw
PDB file : Tito_Scwrl_1YHL.pdb: