Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQALDLDAEGK---HVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQLAEQSLDTSALEALADYIIQRNK |
| 2J1P Chain:A ((13-293)) | --PISYIIRKADSVNKALDSAVPLR--EPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLASATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDIS---LDLNNVGLEHLKFIHLHKTAALLEASAVLGGIIGGGS-DEEIERLRKFARCIGLLFQVVDDILDVTK----------------KLTYPKLMGLEKSREFAEKLNTEARDQLLGFDSD--KVAPLLALANYIANRQN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J1P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147041 for 2301 contacts (-63.9/contact) +
2D Compatibility (PS) -29689 + (NN) -15562 + (LL) 776
1D Compatibility (HY) -18400 + (ID) 5800
Total energy: -215716.0 ( -93.75 by residue)
QMean score : 0.499
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