Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATPPKRFCPSPSTSSEGTRIKKISIEGNIAAGKSTFVNILKQASEDWEVVPEPVARWCNVQSTQEEFEELTTSQKSGGNVLQMMYEKPERWSFTFQSYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESDCMNETEWTIYQDWHDWMNSQFGQSLELDGIIYLRATPEKCLNRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTSFDYLQEVPVLTLDVNEDFKDKHESLVEKVKEFLSTL
2ZI9 Chain:B ((38-279))
------------------TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQ--------------NGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNEDFKDKYASLVEKVKEFLSTL
General information:
TITO was launched using:
RESULT:
Template:
2ZI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98669 for 1737 contacts (-56.8/contact) +
2D Compatibility (PS) -23736 + (NN) -7004 + (LL) 1196
1D Compatibility (HY) -32800 + (ID) 10650
Total energy: -171663.0 ( -98.83 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI9-query.scw
PDB file :
Tito_Scwrl_2ZI9.pdb
: