Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQSNRELVVDFLSYKLSQKGYSWSQFSDVEENRTEAPEGTESEMETPSAINGNPSWHLADSPAVNGATGHSSSLDAREVIPMAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAESRKGQERFNRWFLTGMTVAGVVLLGSLFSRK
3ZLR Chain:B ((32-152))
----------------------------------------------------------------------------------MAAVKQALREAGDEFELRYRRAFSDLTSQLHITPGTAYQSFEQVVNELFRDGVNWGRIVAFFSFGGALCVESVDKEMQVLVSRIAAWMATYLNDHLEPWIQENGGWDTFVELYGNNAAAES------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ZLR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82046 for 794 contacts (-103.3/contact) +
2D Compatibility (PS) -12783 + (NN) -2081 + (LL) 5868
1D Compatibility (HY) -17600 + (ID) 6050
Total energy: -114692.0 ( -144.45 by residue)
QMean score : 0.301
(partial model without unconserved sides chains):
PDB file :
Tito_3ZLR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZLR-query.scw
PDB file :
Tito_Scwrl_3ZLR.pdb
: