Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEEEAPKKSRAAGGGASWELCAGALSARLAEEGSGDAGGRRRPPVDPRRLARQLLLLLWLLEAPLLLGVRAQAAGQGPGQGPGPGQQPPPPPQQQQSGQQYNGERGISVPDHGYCQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLV-KVQCSAELKFFLCSMYAPVCTVLEQALPPCRSLCERARQGCEALMNKFGFQWPDTLKCEKFPVHGAGELCVGQNTSDKGTPTPSLLPEFWTSNPQHGGGGHRGGFPGGAGASERGKFSCPRALKVPSYLNYHFLGEKDCGAPCEPTKVYGLMYFGPEELRFSRTWIGIWSVLCCASTLFTVLTYLVDMRR-FSYPERPIIFLSGCYTAVAVAYIAGFL--LEDRVVCNDKFAEDGARTVAQGTKKE--GCTILFMMLYFFSMASSIWWVILSLTWFLAAGMKWGHEAIEANSQYFHLAAWAVPAIKTITILALGQVDGDVLSGVCFVGLNNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMK--HDGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFRDQWERSWVAQ-SCKSYAIPCPHLQAGGGAPPHPPMSPDFTVFMIKYLMTLIVGITSGFWIWSGKTLNSWRKFYTRLTNSKQGETTV |
| 4JKV Chain:A ((2-470)) | ------------------------------------------------------------------------------------------------------------------------------------------GTADLEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQK---ATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYIQKYLS------------------------GQCEVPLVRTDNPKSWYEDVEGCGIQCQN------PLFTEAEHQDMHSYIAAFGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCR----ADGTMRLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTS-FKALGTTYQPGKTSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGGYFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWERSFRDYVLCQA--------------NCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKATLLIWRRTWC------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -275103 for 3592 contacts (-76.6/contact) +
2D Compatibility (PS) -45416 + (NN) -9830 + (LL) 6564
1D Compatibility (HY) -26400 + (ID) 5800
Total energy: -355985.0 ( -99.10 by residue)
QMean score : 0.235
|
|
|