Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MSNATLLTAFILTGLPHAPGLDAPLFGIFLVVYVLTVLGNLLILLVIRVDSHLHTPMYYFLTNLSFIDMWFSTVTVPKMLMTLVSPSG-RTISFHSCVAQLYFFHFLGSTECFLYTVMSYDRYL---AISYPLRYTNMMTGRSCALLATGTWLSGSLHSAVQTIL-----------TFHLPY-CGPNQIQHYFCDAPPILKL--ACADTSANEMVIFVNIGLVASGCFVLIVLSYVSIVCSILRIRTSEGRHRAFQTCASHCIVVLCFFGPGLFIYLRPGSRDALHGVVAVFYTTLTPLFNPVVYTLRNKEVKKALLKLKNGSVFAQGE |
| 4RKS Chain:A ((21-337)) | TYRSIGSTAYPTIGVVLLGGIANPVTRTPLHTSAGIAYSDSC-GSIRSETRIYADEATH---IYFNGTESTDDNRSVRRVLDRYSSVFEEAFGTKTVSYSSQNFGILSGSSDAGAASIGAAILGLKPDLDPHDVENDLRAVSESAGRSLFGGLTITWSDG-FHAYTEKILDPEAFSGYSIVAFAFDYQRNPSDVIHQNIVRSDLYPARKKHADEHAHMIKEYAKTNDIKG--IFDLAQEDTEEYHSILRGVGVNVIRENMQKLISYLKLIR---KDYWNAYIVTGGS---NVYVAVESENADRLFSIE----NTFGSKKKMLRIVGGAWHRRPE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RKS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -310120 for 2464 contacts (-125.9/contact) +
2D Compatibility (PS) -30872 + (NN) -3004 + (LL) 1228
1D Compatibility (HY) 4800 + (ID) 2900
Total energy: -340868.0 ( -138.34 by residue)
QMean score : 0.135
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