Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------MPLFNSLCWFPTI-HVTPPSFILNGIPG---------LERVHVWISLPLCTMYIIFLV-------GNLGLVYLI-YYEESLHHPMYFFFGHA---LSLIDLLTCTTTLPNALCIFWFSLKEINFNACLAQMFFVHGFTGVESGVLMLMALDRYVAICYPLRYATTLTNPIIAKAELATFLRGVLLMIPFPFLVK----------------RLPFCQSNIISHTYCDHMSVVKLSCASIKVNVIYGLMVALLIGVFDICCISLSYTLILKAAISLSSSDARQKAFSTCTAHI-----SAIIITY--------VPAFFTFFAHRF--GGHTIPPSLHIIVA----------NLYLLLPPTLNPIVYGVKTKQIRKSVIKFFQGDKGAG |
| 4XR7 Chain:B ((1-456)) | MHSLLQYRSADQLFIPNNIREDLTKKNLSILQVFPSSGKVIPSIVQDYFNLVPLNFNNKTTLFKVFSNYDGKAYVLKRLPNIDKSMNPNKISKIYQIWSKINCTNLIKFRDIFQTTKFGDLSICLVFDYYPNSLSLYDYHFVNFPKFPITNNYLWIYLVQLTNVINSIHSQNLSIGNTLNWRKVLITG-----DPGRIKLSHCN-FMDLLFNDDTDTVVSSTIEGQQQLDYKYLGELLFNLSINIENSNNNTAPKEYRLEEITPQSIDDMRQIDDKFKDVLKYLISDNGDSKKS-IHDLTSHFYDKMFMVLESSQTYTEYMESVLSRELENGRLFRLVNKLNCIFGRIESRIDINWSESGTKFPIILFYDYVFHQVDSNGKPIMDLTHVLRCLNKLDAGIQEKLMLVTPDELNCIIIS--YKELKDLIESTFRSITQH- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273827 for 1960 contacts (-139.7/contact) +
2D Compatibility (PS) -32339 + (NN) -1306 + (LL) 408
1D Compatibility (HY) -17200 + (ID) 2850
Total energy: -327114.0 ( -166.89 by residue)
QMean score : 0.093
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