Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTFSSFLQIGRNMHQGNQTTITEFILLGFFKQDEHQNLLFVLFLGMYLVTVIGNGLIIVAISLDTYLHTPMYLFLANLSFADISSISNSVPKMLVNIQTKSQSISYESCITQMYFSIVFVVIDNLLLGTM--AYDHFVAICHPLNYTILMRPRFGILL------TVISWFLSNIIALTHTLLLIQLLFCNHNTLPHFFCDLAPLLKLSCSDTLINELVLFIVGLSVIIFPFT---------LSFFS------YVCIIRAVLRVSSTQGKWKAFSTCGSHLTVVLLFYGTIVGVYFFPSSTHPEDTDKIGAVLF--TVVTPMINP--------FIYSLRNKDMKG---------ALRKLINRKISSL----------------------- |
| 3THI Chain:A ((1-362)) | -----ITLKVAIYPYVPDPARFQAAVLDQWQRQEPGVKLEFTDWDSYSADPPDDLDVFVLDSIFLSHFVDAGYLL--PFGSQDIDQAEDVLPFALQGAKRNGEVYGLPQILCT---NLLFYRKGDLKIGQVDNIYELYKKIGTSHSEQIPPPQNKGLLINMAGGTTKASMYLEALIDVTGQ-------YTEYDLLP----PLDPL-----NDKVIRGLRLLINMAGEKPSQYVPEDGDAYVRASWFAQGSGRAFIGYSESMMRMGDYAEQVRFKPISSSAGQDIPLFYSDVVSVN--SKTAHPELAKKLANVMASADTVEQALRPQADGQYPQYLLPARHQVYEALMQDYPIYSELAQIVNKPSNRVFRLGPEVRTWLKDAKQVLPEALG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3THI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -279178 for 2384 contacts (-117.1/contact) +
2D Compatibility (PS) -31117 + (NN) -6555 + (LL) 3456
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -328444.0 ( -137.77 by residue)
QMean score : 0.257
|
|
|