Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESAVSTSTQVPDEFDRNVPRICGVCGDKATGFHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKELIQRRKDEEAHREAQKPRLSDEQRNIIDTLVDAHHKTYDDSYSDFSRFRPPVREGPVTRSASRAASLHSLSDASSDSFSHSPESGDRKMNLSNLLMMYQEQGLSSSPDSKEEDGSSLSMLPHLADLVSYSIQKVIGFAKMIPGFRELTAEDQIALLKSSAIEVIMLRSNQSFSLEDMSWSCGGPEFKYCVNDVTKAGHTLELLEPLVKFQVGLKKLNLHEEEHVLLMAICLLSPDRPGVQDHVRVEALQDKVSEVLQAYIRAHH--PGGRLLYAKMIQKLADLRSLNEEHSKQYRSLSFQPEHSMQLTPLVLEVFGGQVT
3VJS Chain:A ((18-269))-------------------------------------------------------------------------------------------------------------------------KLSEEQQHIIAILLDAHHKTYDPTYADFRDFRPPVR--------------------------------------------------------------PLSMLPHLADLVSYSIQKVIGFAKMIPGFRDLTSDDQIVLLKSSAIEVIMLRSNQSFTMDDMSWDCGSQDYKYDVTDVSKAGHTLELIEPLIKFQVGLKKLNLHEEEHVLLMAICIVSPDRPGVQDAKLVEAIQDRLSNTLQTYIRCRHPPPGSHQLYAKMIQKLADLRSLNEEHSKQYRSLSFQPENSMKLTPLVLEVFGNE--


General information:
TITO was launched using:
RESULT:

Template: 3VJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129139 for 1848 contacts (-69.9/contact) +
2D Compatibility (PS) -25823 + (NN) -20814 + (LL) 9820
1D Compatibility (HY) -32000 + (ID) 9350
Total energy: -207306.0 ( -112.18 by residue)
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_3VJS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VJS-query.scw
PDB file : Tito_Scwrl_3VJS.pdb: