Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAE-TKLEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTRLRHTKTKCIFVINKIDLVKKPEL-KMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRP-WTDRPEEYIDDV
1EGA Chain:A ((4-292))-DKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTR-WTPDDE--MVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL-


General information:
TITO was launched using:
RESULT:

Template: 1EGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167407 for 2187 contacts (-76.5/contact) +
2D Compatibility (PS) -31397 + (NN) -11888 + (LL) 772
1D Compatibility (HY) -20000 + (ID) 4800
Total energy: -234720.0 ( -107.33 by residue)
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_1EGA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1EGA-query.scw
PDB file : Tito_Scwrl_1EGA.pdb: