Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCSNADTKVGDYPFTTIKPHLGVAKVDNSEVVIVDIPGIITDAHL--GIGLGHKFLKHVERCKILLHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVE--IFEKKNHLANYLNKEVLCLSI--GEDLQPILRLLNEKLKKGSSKKVDVYDPFKR |
| 3I8S Chain:A ((3-170)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------KLTIGLIGNPNSGKTTLFNQLTGSRQRVGNWAGVTVERKEGQFSTTDHQVTLVDLPGTYSLTT-TSLDEQIACHYILSGDADLLINVVDASNLE---RNLYLTLQLLE-----LGIPCIVALNMLDIAEKQNIRIEIDAL--SARLGCPVIPLVSTRGRGIEALKLAIDRYKANENVELVHYAQPLLN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75294 for 1242 contacts (-60.6/contact) +
2D Compatibility (PS) -17124 + (NN) -5808 + (LL) 7004
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -97072.0 ( -78.16 by residue)
QMean score : 0.455
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