Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAHCYIKKLKLSNFRNHLNFELDSDDS-SVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSLENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPINLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSI--RCQAWITDVDQNNFGNYIDYFKTIEL |
| 3ZDQ Chain:A ((359-555)) | ----------------IFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPA------SGT-----------------------------------ISLDGHDI-RQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSS------------------------------------------------------------------------------------VTAEEIQRVAEVANAVAFIRNFP----QGFNTVVGEKG-----VLLSGGQKQRIAIARALLK---------NPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTI-KNANMVAVLDQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47279 for 1480 contacts (-31.9/contact) +
2D Compatibility (PS) -20403 + (NN) -2947 + (LL) 12144
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -61985.0 ( -41.88 by residue)
QMean score : 0.316
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