Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKEFEIEPLLKDKVPHQTKAVVAMSGGVDSSVAAVLLHRLGYQVIGVTLQLYGADGNSNTRKKGVCCAGQDIYDAKRVAEGTGFPHYILNYEEIFKKEVIESFAQTYIQGKTPIPCIKCNQTVKFRDLLQVTRNLG-ADVLITGHYVRRLEKNGEVKLCRGIDKSKDQSYFLFATTKEQLKLLRFPLGGFYKCNVRKLARYFSLPISEKPDSQDICFVSENYSKTIAKLAPQSIQKGKIVDVNGKVLGEHNGIVNFTVGQRKGLGIAYSEPLYVVRINTKNNEIVVGPVNALMQRKILVKELNWLEQPKKGMEVTVKLRSLHSGSLAKIYPAKEQNKAYVILNDDYFSISPGQACVAYKDEQVIGGGWICS |
2YWB Chain:A ((209-373)) | -----------------KDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLR-------------LGEREEVEGALRALGVNLLVVDAKERFLKAL-KGV------EDPEEKRKIIGR-EFVAAFSQVARERGPFRFLAQGTLYPDVIE---------------------GLPEDLEFELLEPFRLLFKDEVRELALLLGLPDTLRLRHPFPGPGLAVRVLGEVTEERLEILRRADDIFTSLLREWGLYEKVAQALAVLTPVGYVLALRAVTTEDFMTADWARLPLEFLDEAARRITRRVPEIGRVVYDLTSKPPATIEWE----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80423 for 1055 contacts (-76.2/contact) +
2D Compatibility (PS) -16088 + (NN) -5723 + (LL) 5968
1D Compatibility (HY) -5600 + (ID) 1600
Total energy: -103466.0 ( -98.07 by residue)
QMean score : 0.434
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