Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGIPNKLDPHEPENLAKAIKKLNLKYVVITSVDRDDLPDGGASQFIKCIEEIRKITPE-TTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMVPRLYARIRPRARYFHSLYLLKMVKQINPKLLTKSGLMVGLGETKEEVLQVMDDLRSAEVDFITIGQYLQPTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSP-LTRSSYHAEEDFNRLKACR-- |
| 1QGO Chain:A ((2-258)) | KKALLVVSFGTSYHDTCEKNIVACERDLAA----SCPDRDLFRAFTS-----------GMIIRKLRQRD------------GIDIDTPLQALQKLAAQGYQDVAIQSLHIIN-----GDEYEKIVREVQLLRPLFTRLTLGVPLLSSHNDYVQLMQALRQQMPSLRQTEKVVFMGHGASHHAFAAYACLDHMMTAQRFP------ARVGAVESYPEVDILIDSLRDEGVTGVHLMPLMLVAGDHAIND--MASDDGDSWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLHQALNM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60560 for 2006 contacts (-30.2/contact) +
2D Compatibility (PS) -26725 + (NN) -15909 + (LL) 1732
1D Compatibility (HY) -5600 + (ID) 1650
Total energy: -108712.0 ( -54.19 by residue)
QMean score : 0.272
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