Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIITIFGPPGSGKGTQSSLLIERYNLKLISVGDLLRNIISSGSELGKKIKDTVESGNLIQDGVICELLYDQL-ALMDDNFLFDGFPRNLNQAHFLTQILRERYNRDVDIVIELQLNDKVAIDRLKNRLVCLDCKSVYSTSSFKD---DNNLVCTRCKSARLEKRIDDSDLSAIDRRIGEYHVQVK---SLREYYRDK-------LLMIDANLNVDQVKQEIESKISCSLV
3L0P Chain:A ((1-223))
MNILIFGPNGSGKGTQGNLVKDKYSLAHIESGGIFREHIGGGTELGKKAKEFIDRGDLVPDDITIPMVLETLESKGKDGWLLDGFPRNTVQAQKLFEALQEK-GMKINFVIEILLPREVAKNRIMGRRICKNNPN-HPNNIFIEAIKPNGDVCRVCGGA-LSARADDQDEGAINKRHDIYYNTVDGTLAAAYYYKNMAAKEGFVYIELDGE-SIDSIKDTLLAQLA----
General information:
TITO was launched using:
RESULT:
Template:
3L0P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91970 for 1526 contacts (-60.3/contact) +
2D Compatibility (PS) -22245 + (NN) -5916 + (LL) 956
1D Compatibility (HY) -12400 + (ID) 3700
Total energy: -135275.0 ( -88.65 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_3L0P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L0P-query.scw
PDB file :
Tito_Scwrl_3L0P.pdb
: