Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFLIVANWKMNGTRSLFVNFIGKLNDKSNEITSKLVICPPFTSLPGNIEL--NSNISIGAQNCHYKKSGSYTGEISAEMLKELGCTYVILGHSERT---HETNGEIKLKSETAIESGLHPIICVGENLEDRESSKTKEVVEYQCKSRLPIHGEYT---VAYEPIWAIGTGHVPSNNAIAEVIEVIQSYTSKK---------HVIYGGSVSLENIENLSNILNLSGVLIGSASLDFDRFHKIVQQVEKAY
4FF7 Chain:A ((4-236))
-TFFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILSIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN----
General information:
TITO was launched using:
RESULT:
Template:
4FF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119612 for 1741 contacts (-68.7/contact) +
2D Compatibility (PS) -23532 + (NN) -8830 + (LL) 288
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -168886.0 ( -97.01 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_4FF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FF7-query.scw
PDB file :
Tito_Scwrl_4FF7.pdb
: