Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTEPNQK---------------------WAKDTQILIISLSTKNFHDHTKIVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRFDRNKIVKN--------SIYQMILI-------------------------- |
| 3GFD Chain:A ((34-255)) | SVEHIPFSHTRYPEQEMRMRSQEFYELLNKRRSVRFISSEHVP-MEVIENVIKAAGTAPSGAHTEPWTFVVVKDPDMKHKIREIIEEEEEINYMKRMGKRWVTDLKKLRTNWIKEYLDTAPVLILIFKQVHGFNGKKKVHYYNEISVSIACGLLLAALQNAGLVTVTTTPLNCGPRLRVLLGRPSHEKLLVLLPVGYPSRDATVPDLKRKALDQIMVTVHH |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55112 for 1031 contacts (-53.5/contact) +
2D Compatibility (PS) -15880 + (NN) -5135 + (LL) 44
1D Compatibility (HY) -8000 + (ID) 1150
Total energy: -85233.0 ( -82.67 by residue)
QMean score : 0.380
|
|
|