Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDLSKITIASDA---VNVIIEISANAEPVKYEFDKELGLLRVDRFLSTAMVYPCNYGFVPNTCAGDGDPVDVLVLTQFPLAPGVLISVRPVGALLTKDEKGKDEKVLAVPVSSVDSYYDHVKNCSDLPKNLLDKITHFFLHYKDLEKEKTVTVGEWVDAEKAKKIVESAIKSRN
3SW5 Chain:E ((7-177))
--IKEIAVGKNPPEDVNVIVEVSLGGQPIKYEMDKKSGALFVDRFLYTSMVYPGNYGFVPHTLSEDGDPIDVLICNTRPLLPGCVINVYPIGALIMEDDGGKDEKIIAIPTPKLTQRYNNIHDYTDLPEITLKQIEHFFEHYKDLEPGKWAKIEGWRDKSFAHELIKQAIE-RN
General information:
TITO was launched using:
RESULT:
Template:
3SW5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105882 for 1275 contacts (-83.0/contact) +
2D Compatibility (PS) -17974 + (NN) -3146 + (LL) 104
1D Compatibility (HY) -17600 + (ID) 4000
Total energy: -148498.0 ( -116.47 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_3SW5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SW5-query.scw
PDB file :
Tito_Scwrl_3SW5.pdb
: