Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLNEQPDVLTFLNSNLKGISKFHFGILSKLCGGNKVMDLLFYRPLSYVDRSKSLLDARVGELTTFIAKIYEHQPPTFRGRPYKIVVESKSQYIFIVFFNYSIKYLYKLFPIGANVIISGKLEKFAEHWQVTHPDYVLLDTNQFEEIARVEPVYQLCRGITNKSIRNIINSNLKELPDLPEWIGDTLIKQNKWLSWKESIIKLHRPNSLAEAEICRRRLAYDELFAYQMALKLARENHVRKRGREFTISNKYKEQVLNELSF-QLTNDQIRAIDEISERQKSKCRMVSLLQGDVGSGKTVVALFAMLNVIEN-------NMQAALMAPTTILAEQHYNWIEEALSYT-D---IKIALLTGKTTRKERKIITNELASGILKIIIGTHALFQAN------VTFKNLGLAVIDEQQRFGVIQRNCLV----GK--------GENADILFVTATPIPRTLQQAI--YGDVECSILREK----PKSRLPIKTVAMNIK----KLVEVIEKLKSAI---NRGEKAYWICPCIGGNEGLNIAAAEMRFQELQKTFF-N-KVGIIHGKLTQVQKDQVMFSFKRNEFPLLVATTVIEVGIDVPDATIMIIENAEQFGLSQLHQLRGRVGRGNKPSFCVLLYNNISKSSFSKLKIMCESQDGFYIAEKDMMLRGSGDILGLKQSGCMEFKFADLYKDRELLNLAYNNTKSAIAENKSFELLLDIFEYRSRLHFSKFQ |
| 3SQW Chain:A ((32-398)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IHKAITRMEFPGLTPVQQKTIKPILSSE----DHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFR---AAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTV--------KFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDVGARGMDFPNVHEVLQIGVPS-ELANYIHRIGRTARSGKEGSSVLFICKDELPFVRELEDAKNIVIAKQEKYEPSEEIKSEVLEAVTEEPEDISDIVISLISSYRSCIKEYRFSERRILPEIASTYGVLLNDPQLKIPVSRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SQW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194752 for 2683 contacts (-72.6/contact) +
2D Compatibility (PS) -35197 + (NN) -13078 + (LL) 19056
1D Compatibility (HY) -12000 + (ID) 3650
Total energy: -239621.0 ( -89.31 by residue)
QMean score : 0.423
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