Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIQSILRLLYITAVLTRYNISPYLLSPSRKSINRIRGYKLRCAFEKLGPVFIKFGQSISSRTDILNEDITNNLLLICDKLPSFSHKIAVKTIESEFNCKLSDIFSSFSEKPIAAASISQAHKATTT-EGKEVAVKILRPNIEKTFSKDIKMLFWLAGIVEKFSKQSRRLKPIELVETFAEICRLELDLRFEAAHSSELRENTKNDRGFYVPEVDWSRTSKRVLTLEWIGATPVYEVEKLN------NHKQIAINLIESFCNQVYRDCFFHADMHPGNLMIDS---NNSIVALDCGIMGRIDRETCYYVIEILKGFLNRDYDRVAKVHFRAGYVSPQHKSFVTACRAIGEPIIGQPIQKISFASLLAQLLKITGDFDMKVQTQLLLLQKTMILLEGTCRKIYPE-INVWKVVEAWTENQHKNKISYKERIKSSYPVKTIQEIFNLIEKLNLIANQKLENIQIKDRSNGKIYFLLWSMVIALIVKLLIFL |
| 3SOA Chain:A ((17-269)) | -------------------------------------------------------------------------------------------------------------EELGKG--SVVRRCVKVLAGQEYAAMIINTKKLSA--R------------------------------------DHQKLEREARICRLLK----HPNIVRLHDSISE-EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA-VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA----------------WFGFAGTPGYLSPEV---------LRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI-----KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEII |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76133 for 1816 contacts (-41.9/contact) +
2D Compatibility (PS) -25601 + (NN) -10655 + (LL) 15144
1D Compatibility (HY) -5600 + (ID) 1850
Total energy: -104695.0 ( -57.65 by residue)
QMean score : 0.356
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