Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER
3G4C Chain:D ((17-221))
-------------------------ILDKGFVELVDVMGNDLSAVRAARVSF-------ERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELCGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEV---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3G4C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156960 for 1468 contacts (-106.9/contact) +
2D Compatibility (PS) -20584 + (NN) -1061 + (LL) 5432
1D Compatibility (HY) -19600 + (ID) 4750
Total energy: -197523.0 ( -134.55 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3G4C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G4C-query.scw
PDB file :
Tito_Scwrl_3G4C.pdb
: