Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | --MFFKQFYEDNFSQASYLIGCQRTGEAMIIDPIRDLTKYLKVADKEGFTITKAAETHIHADFASGIRDVANKLNASIYVSDEGKDEFNYKNMPKQTHFVKHQDIIYLGKIKLEVLHTPGHPPESISFLLTDEGGGSSIPMGLFSGDFIFVGDVGRPDLLEKAVNVEGSTKIGAKQMYQSI-QFAATLPDYIQIWPGHGAGSPCGKALGSLPTTTLGYEKINNWAFNVKDETSFIETLTLNQPAPPHHFSQMKKINQF-GMQMYQPYNVYPSSSNTQTAFDLRSKEAFHGGHMHGTINIPFNKTFINQIGWYLDYD |
1QH5 Chain:A ((1-260)) | MKVEVLPALTDNYM---YLVIDDETKEAAIVDPV-QPQKVVDAARKHGVKLTTVLTTHHHWDHAGGNEKLVKLESGLKVYGGD-------DRIGALTHKITHLSTLQVGSLNVKCLATPCHTSGHICYFVSKPGGSE--PPAVFTGDTLFVAGCGKF--------YEGT----ADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSI---------GEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQF--------KMPRD-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QH5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103299 for 2245 contacts (-46.0/contact) +
2D Compatibility (PS) -27427 + (NN) -10549 + (LL) 3268
1D Compatibility (HY) -7600 + (ID) 2850
Total energy: -148457.0 ( -66.13 by residue)
QMean score : 0.410
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