Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYYQ-PL-WTLVGAGVSSLKSSRKDMESVIP-EGANWIK-QAVSSFQPENNSVILGDNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFD---VGKYNKELERIVEERNITVNYNYNLVEIDGDKK---VATFEHIKAYDRKTISYDMLHVTPPMGPL-DVVKESTLSDSEGWVDVNPTTLQHKSYSNVFALGDASNVPT---------SKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3LXD Chain:A ((7-321)) | -AERADVVIVGAGHGGAQAAIALR--QNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADL----AGVHAVRTKEDADRLMAELD---------AGAKNAVVIGGGYIGLEA--AAVLTKFG----VNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQD-----GSVIPADIVIVGIGIVPCVGALISAGAS-GGNGVDVDE-FCR-TSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165885 for 2457 contacts (-67.5/contact) +
2D Compatibility (PS) -31838 + (NN) -6352 + (LL) 6620
1D Compatibility (HY) -7600 + (ID) 2450
Total energy: -207505.0 ( -84.45 by residue)
QMean score : 0.457
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