Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTK----EEELESALL--KADFIVHLAGVNRPE----HDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ---------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV |
| 3SC6 Chain:A ((6-235)) | ERVIITGANGQLGKQLQEELNPEE-YDIYPFDKKLLDITNISQVQQVVQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG--AKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGNN----FVKTMIRLGKEREEISV-VADQIGSPTYVADLNVMINKLIHTSL---YGTYHVSNTGSCSWFEFAKKIFSYANMKV----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118917 for 1614 contacts (-73.7/contact) +
2D Compatibility (PS) -22109 + (NN) -9147 + (LL) 8436
1D Compatibility (HY) -11200 + (ID) 2300
Total energy: -155237.0 ( -96.18 by residue)
QMean score : 0.556
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