Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHNDLKEVLLTEEDIQNICKELGAQLTKDYQ------GKPLVCVGILKGSAMFMSDLIKRIDTHLSIDFMDVSSYHGGTESTGEVQIIKDLGSSIENKDVLIIEDILETGTTLKSITELLQSRKVNSLEIVTLLDKPNRRKADIEAKYVGKKIPDEFVVGYGLDYRELYRNLPYIGTLKPEVYSN
4RHX Chain:A ((21-200))
---DIKSVLLTAEQIQARIAELGEQIGNDYRELSATTGQDLLLITVLKGAVLFVTDLARAIPVPTQFEFMAVSSYGS----SGVVRILKDLDRDIHGRDVLIVEDVVDSGLTLSWLSRNLTSRNPRSLRVCTLLRKPDAVHANVEIAYVGFDIPNDFVVGYGLDYDERYRDLSYIGTLDPRVY--
General information:
TITO was launched using:
RESULT:
Template:
4RHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132469 for 1307 contacts (-101.4/contact) +
2D Compatibility (PS) -18164 + (NN) -2224 + (LL) 20
1D Compatibility (HY) -22000 + (ID) 4200
Total energy: -179037.0 ( -136.98 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_4RHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RHX-query.scw
PDB file :
Tito_Scwrl_4RHX.pdb
: