Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLKRMRDDIKMVFEQDPAARSTLEVITTYAGLHAVWSHLIAHKLYNQ-KKYVAARAISQISRFFTGIEIHPGAKIGKRLFIDHGMGVVIGETCTIGDNVTIYQGVTLGGTGKERGKRHPDIGDNVLIAAGAKVLGNIKINSNVNIGANSVVLQSVPSYSTVVGIPGHIVKQDGVRVGKTFDHRHLPDPIYEQIKHLERQLEKTRNGEIQDDYII
3GVD Chain:D ((80-247))MIVSAARDILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWAQDRKALAIYLQNQVSVAF-GVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIV---------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -135540 for 1379 contacts (-98.3/contact) +
2D Compatibility (PS) -18079 + (NN) -6206 + (LL) 2832
1D Compatibility (HY) -11600 + (ID) 3800
Total energy: -172393.0 ( -125.01 by residue)
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_3GVD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GVD-query.scw
PDB file : Tito_Scwrl_3GVD.pdb: