Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALSTDEFNQI-KHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKEDDVEKFDVDVFVMGHDWEGEFDFLK-------DKCEVIYLKRTEGISTTKIKQELYGKDAK
3HL4 Chain:A ((76-213))
PVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKG-FTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPYSSAGSDDVYKHIKEAG-MFAPTQRTEGISTSDIITRIVRDY--
General information:
TITO was launched using:
RESULT:
Template:
3HL4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49946 for 910 contacts (-54.9/contact) +
2D Compatibility (PS) -14351 + (NN) -5935 + (LL) 328
1D Compatibility (HY) -4400 + (ID) 1650
Total energy: -75954.0 ( -83.47 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3HL4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HL4-query.scw
PDB file :
Tito_Scwrl_3HL4.pdb
: