Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGG-----QMANTEEVENFPGFEM-ITGPDLSTKMFEHAKKFGAVYQYGDIKSVE-DKGEYKVINFGNKELTAKAVIIATGAEYKKIGVPGEQELGGRGVSYCAVCDGA--FFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELRAQRILQDRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITNDVGYIVTKDDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEHLNDQA |
| 4A5L Chain:B ((6-312)) | ------DVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQVKTADDGYILTEGP-KTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQ------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4A5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159154 for 2533 contacts (-62.8/contact) +
2D Compatibility (PS) -31630 + (NN) -5284 + (LL) 1160
1D Compatibility (HY) -22800 + (ID) 6050
Total energy: -223758.0 ( -88.34 by residue)
QMean score : 0.521
|
|
|