Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MRIIKYLTILVI----SVVILTSCQSSSSQESTKSGEFRIVPTTVALTMTLDKLDLPIVGKPTSYKTLPNRYKDVPEIGQPMEP------NVEAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQKKHPKVLILMGVPGSYLVATDKSYIGDLVKIAGGENVIKVK-DRQYISSNTENLLNINPDIIL-RLPHGMPEEVKKMFQKEFKQNDIWKHFKAVKNNHVYDLEE----------VPFGITAN--------VDADKAMTQLYDLFYKDKK--------- |
| 4INO Chain:A ((1-302)) | QEVKVKDYFGEQTIKLPVSKIIYL-------------GSFAEVPAMFH---TWDRVVG-ISDYAFKSDIVKATLKD-PERIKPMSSDHAAALNVELLKKLSPDLVVTFVG-NPKAVEHAKKFGISFLSFQEKTIAEVMEDIDTQAKALEV--DASKKLAKMQETLDFIAERLKGVKKKKGVELF---HKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIWWISPLS-------PEDVLNNPKFATIKAIKNKQVYKLPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84273 for 1995 contacts (-42.2/contact) +
2D Compatibility (PS) -27975 + (NN) -13749 + (LL) 2316
1D Compatibility (HY) -14400 + (ID) 2600
Total energy: -140681.0 ( -70.52 by residue)
QMean score : 0.444
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