Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKIVVALGGNALGKSPQ---EQLELVKNTAKSLVGLITKGHEIVISHGNGPQVGSINLGLN-YA----AEHNQGPAFPFAECGAMSQAYIGYQLQESLQNELHSIGMDKQVVTLVTQVEVDENDPAFNNPSKPIGLFYNKEE---AEQI------QKEKGF---IFVEDAGRGYRRVVPSPQPISIIE---LESIKTLIKNDTLVIAAGGGGIP-VIREQHDGFKGIDAVIDKDKTSALLGANIQCDQLIILTAIDYVYINFNTENQQPLKTTNVDELKRYIDENQFAKGSMLPKIEAAISFIENNPKGSVLITSLNE-LDAALEGK-VGTVIKK |
2WE5 Chain:A ((2-310)) | GKKMVVALGGNAILSNDASAHAQQQALVQTSAYLVHLIKQGHRLIVSHGNGPQVGNLLLQQQAADSEKNPAMPLDT-----CVAMT-QGSIGYWLSNALNQELNKAGIKKQVATVLTQVVVDPADEAFKNPTKPIGPFLTEAEAKEAMQAGAIFKEDAGRGWRKVVPS----------------PKPIDIHEAETINTLIKNDIITISCGGGGIPVVGQELKGVEAV----IDKDFASEKLAELVDADALVILTGVDYVCINYGKPDEKQLTNVTVAELEEYKQAGHFAPGSMLPKIEAAIQFVESQP-NKQAIITSLENLGSMSGDEIVGTVVTK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134949 for 2294 contacts (-58.8/contact) +
2D Compatibility (PS) -30871 + (NN) -13473 + (LL) 1188
1D Compatibility (HY) -18000 + (ID) 6100
Total energy: -202205.0 ( -88.15 by residue)
QMean score : 0.542
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