Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDYEDIQLIPNKCIVESRSECDTTIQFGPKKFK-----LPVVPANMQTVMNEKLAKWFAENDYFYIMHR-FDEEARIPFIKHMQNSGLFASISVGVKKAEFDFIEKLAQEKLIPEYITIDIAHGHSDSVINMIKHIKNHIPDSFVIAGNVGTPEGVRELENAGADATKVGIGPGRVCITKIKTGFGTGGWQLAALNICSKAA---RKPLIADGGIRTHGDIAKSIRFGASMVMIGSLFAAHEESPGETVELDGKQYKEYFGSASEFQK----GEHKNVEGKKMFVEHKGSLMDTLKEMQQDLQSSISYAGGKDLKSL-RTVDYVIVRNSIFNGDRD |
| 2C6Q Chain:G ((20-347)) | ---LDFKDVLLRPKRSTLKSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDTVGTFEMAKVLCKFSLFTAVHKHYSLVQWQEFAGQNPDCLEHLAASSGTGSSDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVGIGPGSVCTTRKKTGVGY--PQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLAGHSESGGELIERDGKKYKLFYGMSSEMAMKKYA-----SEGKTVEVPFKGDVEHTIRDILGGIRSTCTYVGAAKLKELSRRTTFIRVT--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139612 for 2739 contacts (-51.0/contact) +
2D Compatibility (PS) -33243 + (NN) -9031 + (LL) 16
1D Compatibility (HY) -17600 + (ID) 5500
Total energy: -204970.0 ( -74.83 by residue)
QMean score : 0.470
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