Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPLETKLAVVADTKRQGSVILAATPKLKELGIKTGSRLFEIPHRN-DIYIINPSMRKYLNVSVAISKIALRYIPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYCTVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGINRRTEAKLNKRGIFTIGDLAKYPYKFLKKEFG-ILGVDMHLHANGIDQSKVREKHKISNPSICKSQILMRDYHFDEAKVVMQELIEDVASRVRARKKVARTIHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVMHFADKL--CNKQALYRTLSISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAVSFTEAGTKHGRLGLMAGHKM |
| 1K1Q Chain:A ((1-344)) | ---------MIVIFVDFDYFFAQVEEVLN--PQYKGKPLVVS--------VYSANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHAD--KIEVASIDEAYLDVTNKVEGNFENGIELARKIKQEILEKEKITVTVGVAPNKILAKIIAD---KSKPNGLGVIRPTEVQDFLNEL-DIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVENKSK---IPHGRYLTLPYNTR--DVKVILPYLKKAINEAYNKVNGIPMRITVIAIMEDLDILSKGKKFKHGIS-IDNAYKVAEDLLRELLVRDKRRNVRRIGVKLDNIIIN------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183798 for 2604 contacts (-70.6/contact) +
2D Compatibility (PS) -35118 + (NN) -13339 + (LL) 5960
1D Compatibility (HY) -15200 + (ID) 3650
Total energy: -245145.0 ( -94.14 by residue)
QMean score : 0.437
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