Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLTVGRNIIHGSDSLESAEREINLWFNENEITSYASPRDAWLYE
1S59 Chain:C ((5-153))
VEETYIMVKPDGIQRGLVGEIISRFEKKGFKLIGLKMFQCPKELAEEHYKDLSAKSFFPNLIEYITSGPVVCMAWEGVGVVASARKLIGKTDPLQAEPGTIRGDLAVQTGRNIVHGSDSPENGKREIGLWFKEGELCKWDSALATWLRE
General information:
TITO was launched using:
RESULT:
Template:
1S59.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74578 for 1112 contacts (-67.1/contact) +
2D Compatibility (PS) -16210 + (NN) -6763 + (LL) 0
1D Compatibility (HY) -15600 + (ID) 3850
Total energy: -117001.0 ( -105.22 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1S59.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S59-query.scw
PDB file :
Tito_Scwrl_1S59.pdb
: