Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVK-----PIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGAKELNSELLDADFGYAIDASADVGTTVVGAPTQM-----------------LISAKIIG-KTAHASTP-KEG-VSAINIAAKAISRMKLGQVDEITTANIGKFHGGSATNIVADEVILEAEARSHD--PER-IKTQVKHMTDVFE----------------------------------------------------------------------------------------TTASELGGKAEVTVEQSYPGFKINDNEAVVKIAQESARN-LGLSANTIISGGGSDGSIINT--FGIPSVILGVGYEKIHTTNERMPIKSLNLLASQVLEIIKIVARQSK |
| 2QYV Chain:A ((8-486)) | -LQPKLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE--------VGNVLIRKPATVGMENRKPVVLQAHLDMVPQ-----QDPILPYID-GDWVKAKGT-TLGADNGIGMASALAVLESNDI---AHPELEVLLTMTEERGMEGAIGLRPNWLRSEILINTDTEEN-GEIYIGCAGGENADLELPIEYQVNNFEHCYQVVLKGLRGGHSGVDIHTGRANAIKVLLRFLAELQQN--QPHFDFTLANIRGGSIRNAIPRESVATLVFNGDITVLQSAVQKFADVIKAELALTEPNLIFTLEKVEKPQQVFSSQCTKNIIHCLNVLPNGVVRNSDVIENVVETSLSIGVLKTEDNFVRSTMLVRSLIESGKSYVASLLKSLASLA--QGNINLSGDYPGWEPQSHSDILDLTKTIYAQVLGTDPEIKVIHAGLECGLLKKIYPTIDMVSIGPTIRNAHSPDEKVHIPAVETYWKVLTGILAHIPS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117102 for 2794 contacts (-41.9/contact) +
2D Compatibility (PS) -37559 + (NN) -11463 + (LL) 1792
1D Compatibility (HY) -17200 + (ID) 3100
Total energy: -184632.0 ( -66.08 by residue)
QMean score : 0.415
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