Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERA-GLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNGQLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGCDTCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAIL-ALAHFNEVDAIPELKKVA-TTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE--- |
4D50 Chain:A ((1-290)) | -------GPLGSMVTEQEVDAIGQTLVDPKQPLQARFRALFTLRGLGG------------------PGAIAWISQAFD-------------------------DDSALLKHELAYCLGQMQDARAIPMLVDVLQDTRQEPMVRHEAGEALGAIGD---------------PEVLEILKQYSSDPVIEVAETCQLAVRRLEWLQQHGGEPAAGPY------LSVDPAPP--------------------AEERDVGRLREALLDESRPLFERYRAMFALRNAGGEEAALALAEGLHCGSALFRHEVGYVLGQLQHEAAVPQLAAALARCTENPMVRHECAEALGAIARPACLAALQAHADDPERVVRESCEVALDMYEHETG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19321 for 2421 contacts (-8.0/contact) +
2D Compatibility (PS) -30255 + (NN) -10171 + (LL) 5156
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -63091.0 ( -26.06 by residue)
QMean score : 0.208
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