Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKKTIYFICTGNSCRSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDISNHTSDLIDNDILKQSDLVVTLCSDADNNCPILPPNVKKEHWGFDDPAGKE------WSEFQRVRDEIKLAIEKFKLR
1JL3 Chain:A ((3-137))
--NKIIYFLCTGNSCRSQMAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLVVTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAET
General information:
TITO was launched using:
RESULT:
Template:
1JL3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52202 for 1037 contacts (-50.3/contact) +
2D Compatibility (PS) -14395 + (NN) -8905 + (LL) 132
1D Compatibility (HY) -14800 + (ID) 4300
Total energy: -94470.0 ( -91.10 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_1JL3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JL3-query.scw
PDB file :
Tito_Scwrl_1JL3.pdb
: