Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGG-NKDKREYFENATAQIGAKLLVCDIREQFFNDVLFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQASGEKP-QFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYREMVFEDGVIVKNGRYFVLPHNARLVVARNEEENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELYPLDKENAREYLFA |
| 3VRH Chain:A ((47-237)) | --DERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISGYSEKSEEYAKKQCKLIGAPLHIVRIKEILGY-GIGEV----KTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDE--ASF-LLNNILHWNTEY------------LAKGGPILPQQGKFIKKVKPLYEV------------------------TEREVVAYALAVGLEYIVE---ECPY----TTLDMKGVLNELEEKRPGTKFNFVRGYLKKKKLFEPKECKICRMPSSGDICAFCKFWGLKKEINFKVSSTDEEPFG----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72337 for 1415 contacts (-51.1/contact) +
2D Compatibility (PS) -19868 + (NN) -5751 + (LL) 6464
1D Compatibility (HY) -1200 + (ID) 1800
Total energy: -94492.0 ( -66.78 by residue)
QMean score : 0.462
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