Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEIILITGAYGMVGQNTALYFKKNKPDV-TLLTP--------------------------KKSELYLLDKDNVQAYLKEYKPTGIIHCAGRVGGIVANMNDLSTYMVENLLMGLYLFSSALDLGVKKAINLASSCAYPKYAPNPLKESDLLNGSLEPTNEGYALAKLSVMKYCEYVSAEKGVFYKTLVPCNLYGEFDKFEEKIAHMIPGLIARMHTAKLKNEKNFAMWGDGTARREYLNAKDLARFIALAYENI-AQMPSVMNVGSGVDYSIEEYYEKVAQVLDYKGVFV-K----DSSKPVGMQQKLMDISKQK-ALKWELEIPLEQGIKEAYEYYLKLLEV |
| 1SB8 Chain:A ((27-351)) | -PKVWLITGVAGFIGSNLLETLLKL---DQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--GVDYVLHQAALGSVPRSI-NDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDT----IGKPLS-PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSM---IQ--GDDVYINGDGETSRDFCYIENTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPKYDVSAGVALAMPWYIMFLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -155341 for 2593 contacts (-59.9/contact) +
2D Compatibility (PS) -30534 + (NN) -9075 + (LL) 992
1D Compatibility (HY) -5200 + (ID) 3150
Total energy: -202308.0 ( -78.02 by residue)
QMean score : 0.467
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