Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------MFSFLEKNPFFFTLAFIFVFSIAG----LVEILPNFFKSARPIEGLRPYTVLETAGRQIYIQEGCYHCHSQLIRPFQAEVDRYGAYSLSGEYAYDRPFLWGSKRIGPDLHRVGDYRTTDWHEKHMLDPKSVVPH----SIMPAYKHLFIKKSDFDTAYAEALTQKKVFGVPYD---TENGVKLGNVEEAKKAYLEEAKKITADMKDK--RVLEAIERG-EVLEIV------ALIAYLNSLGN-SRINANQNAK |
| 1GS5 Chain:A ((1-258)) | MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALA-------GTANKTLLAWAKKHQI-AAVGLFLGDGDSVKVTQL-DEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GS5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -28897 for 1645 contacts (-17.6/contact) +
2D Compatibility (PS) -23762 + (NN) -6698 + (LL) 688
1D Compatibility (HY) -1600 + (ID) 1750
Total energy: -62019.0 ( -37.70 by residue)
QMean score : 0.281
|
|
|