Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQDLIKEALLDAGQEVV-----
2KYZ Chain:A ((1-67))
MRYVLYVPDISCNHCKMRISKALEEL-GVKNYEVSVEEKKVVVETEN---LDSVLKKLEEIDYPVESYQEV
General information:
TITO was launched using:
RESULT:
Template:
2KYZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54152 for 409 contacts (-132.4/contact) +
2D Compatibility (PS) -6740 + (NN) -1896 + (LL) 160
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -68628.0 ( -167.79 by residue)
QMean score : 0.769
(partial model without unconserved sides chains):
PDB file :
Tito_2KYZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KYZ-query.scw
PDB file :
Tito_Scwrl_2KYZ.pdb
: