Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKALKILSVGALLFVALNAKDFSKTSDEDLAKMAGVVAPQDIVDYTKELKKRMEK---------MPEDKRKAFHKQLHEYATKNTDKMTVADFEARQKAIKEALKKGNMEDMDDDFGLRSCKHGKKHKHDKHGKKHGKKHDKDHDDKDHDHHDEDHSDKH
1ZTS Chain:A ((1-139))
-----------MLLITPDELKSYSVF--ESVKTRPDELLKQDILEATADIILKVGHDFSDAEYIPLPETVRLALLKLSQFYALINGDESIIKGYTTEKIGDYSYTLGDGSSLQKPDVYALIKDYVKPADPDLEGIEAKVRMRSILEHHHHHH---------
General information:
TITO was launched using:
RESULT:
Template:
1ZTS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 36057 for 801 contacts (45.0/contact) +
2D Compatibility (PS) -13437 + (NN) -2960 + (LL) 1032
1D Compatibility (HY) -1200 + (ID) 1200
Total energy: 18292.0 ( 22.84 by residue)
QMean score : 0.294
(partial model without unconserved sides chains):
PDB file :
Tito_1ZTS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZTS-query.scw
PDB file :
Tito_Scwrl_1ZTS.pdb
: