Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MLVDSFNRVIDY----IRVSVTKQ-CNFRCQYCMPTTPLDFFDDEELLPLDNVLEFLKIAIDEGVKK---IRITGGEPLLRKGLDEFIAKLHAYNKEVALVLSTNGF---SLKKMAKGLKDAGLSRVNV-SLDSLKSDRVLKISQKDALKNTLEGIEESLKVGLKLKLNTVVMKGVND--DEILELLEYAKNRSIQIRYIEFMENTHAKSLVKGLKEKEILDLIAQKYKIMGMEKPKQGSSKIYTLENGYQFGIIAPHSDDFCQSCNRIRLASDGKICPCLYYQDAIDAKEAIINKDTKMMKRLLKQSIINKPEKNMWNDKNGGTPTRAFYYTGG |
| 3C8F Chain:A ((1-245)) | SVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWDTHGGKEV-TVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACK-KEGIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSN----HRTLEFAKYLANKNVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMG-NVEKIELLP-----------------------YHELGKHKWVA------------------------------------------MGEEYKLDGVKPPKKETMERVKGILEQYGHKVMF--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -40491 for 1811 contacts (-22.4/contact) +
2D Compatibility (PS) -24255 + (NN) -9077 + (LL) 4428
1D Compatibility (HY) -9200 + (ID) 2200
Total energy: -80795.0 ( -44.61 by residue)
QMean score : 0.275
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